Structure of PDB 1k6o Chain B Binding Site BS02
Receptor Information
>1k6o Chain B (length=85) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLL
VASETGHVYTFATRKLQPMITSETGKALIQTCLNS
Ligand information
>1k6o Chain E (length=23) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tgtcctaatatggacatcctgtg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1k6o
Crystal structure of a ternary SAP-1/SRF/c-fos SRE DNA complex.
Resolution
3.19 Å
Binding residue
(original residue number in PDB)
G142 R143 V144 R156 T160 K163 R164 K170
Binding residue
(residue number reindexed from 1)
G6 R7 V8 R20 T24 K27 R28 K34
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000987
cis-regulatory region sequence-specific DNA binding
GO:0003677
DNA binding
GO:0046983
protein dimerization activity
Biological Process
GO:0045944
positive regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1k6o
,
PDBe:1k6o
,
PDBj:1k6o
PDBsum
1k6o
PubMed
11846562
UniProt
P11831
|SRF_HUMAN Serum response factor (Gene Name=SRF)
[
Back to BioLiP
]