Structure of PDB 1htw Chain B Binding Site BS02
Receptor Information
>1htw Chain B (length=158) Species:
727
(Haemophilus influenzae) [
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MESLTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLT
RGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYRLADPEELEFMGI
RDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQTNLGK
NIISAFSN
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
1htw Chain B Residue 660 [
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Receptor-Ligand Complex Structure
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PDB
1htw
Crystal structure of the YjeE protein from Haemophilus influenzae: a putative Atpase involved in cell wall synthesis
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
D10 E11 M14 L42 G43 G45 K46 T47 T48 D136 R138
Binding residue
(residue number reindexed from 1)
D10 E11 M14 L42 G43 G45 K46 T47 T48 D136 R138
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0046872
metal ion binding
Biological Process
GO:0002949
tRNA threonylcarbamoyladenosine modification
GO:0008033
tRNA processing
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Cellular Component
External links
PDB
RCSB:1htw
,
PDBe:1htw
,
PDBj:1htw
PDBsum
1htw
PubMed
12112691
UniProt
P44492
|TSAE_HAEIN tRNA threonylcarbamoyladenosine biosynthesis protein TsaE (Gene Name=tsaE)
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