Structure of PDB 1f4t Chain B Binding Site BS02
Receptor Information
>1f4t Chain B (length=367) Species:
2287
(Saccharolobus solfataricus) [
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MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERL
EDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADIFSPQKLQTLETFIR
ETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDL
VAFRLGKPGEIFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKL
GYIILLLIAGNETTTNLISNSVIDFTRFNLWQRIREENLYLKAIEEALRY
SPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIP
DRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVP
NEVLNGYKRLVVRLKSN
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1f4t Chain B Residue 410 [
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Receptor-Ligand Complex Structure
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PDB
1f4t
Crystal structure of a thermophilic cytochrome P450 from the archaeon Sulfolobus solfataricus.
Resolution
1.93 Å
Binding residue
(original residue number in PDB)
M68 L69 H76 R80 L205 G210 T213 T214 L217 T257 R259 S309 F310 G311 H315 C317 G319
Binding residue
(residue number reindexed from 1)
M68 L69 H76 R80 L205 G210 T213 T214 L217 T257 R259 S309 F310 G311 H315 C317 G319
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
F153 A209 E212 T213 T214 C317 L318 G319 E326 L354
Catalytic site (residue number reindexed from 1)
F153 A209 E212 T213 T214 C317 L318 G319 E326 L354
Enzyme Commision number
1.11.1.7
: peroxidase.
1.14.-.-
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0004601
peroxidase activity
GO:0005506
iron ion binding
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0140825
lactoperoxidase activity
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1f4t
,
PDBe:1f4t
,
PDBj:1f4t
PDBsum
1f4t
PubMed
10859321
UniProt
Q55080
|CP119_SULAC Cytochrome P450 119 (Gene Name=cyp119)
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