Structure of PDB 1akh Chain B Binding Site BS02
Receptor Information
>1akh Chain B (length=78) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TKPYRGHRFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIK
NWVSNRRRKEKTITIAPELADLLSGEPL
Ligand information
>1akh Chain D (length=21) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tatgatgtaaatttttacatg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1akh
Crystal structure of the MATa1/MATalpha2 homeodomain heterodimer in complex with DNA containing an A-tract.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
Y131 R132 G133 R135 F136 Q175 N182 K186
Binding residue
(residue number reindexed from 1)
Y4 R5 G6 R8 F9 Q48 N55 K59
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
View graph for
Molecular Function
External links
PDB
RCSB:1akh
,
PDBe:1akh
,
PDBj:1akh
PDBsum
1akh
PubMed
9838003
UniProt
P0CY08
|MTAL2_YEAST Mating-type protein ALPHA2 (Gene Name=MATALPHA2)
[
Back to BioLiP
]