Structure of PDB 1a5s Chain B Binding Site BS02
Receptor Information
>1a5s Chain B (length=387) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TLLNPYFGEFGGMYVPQILMPALNQLEEAFVRAQKDPEFQAQFADLLKNY
AGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
KSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLM
GAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVR
EFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFINDTSVGL
IGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISA
GLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESS
HALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHD
Ligand information
Ligand ID
SER
InChI
InChI=1S/C3H7NO3/c4-2(1-5)3(6)7/h2,5H,1,4H2,(H,6,7)/t2-/m0/s1
InChIKey
MTCFGRXMJLQNBG-REOHCLBHSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CO)C(O)=O
OpenEye OEToolkits 1.5.0
C(C(C(=O)O)N)O
CACTVS 3.341
N[C@@H](CO)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CO
OpenEye OEToolkits 1.5.0
C([C@@H](C(=O)O)N)O
Formula
C3 H7 N O3
Name
SERINE
ChEMBL
CHEMBL11298
DrugBank
DB00133
ZINC
ZINC000000895034
PDB chain
1a5s Chain B Residue 902 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1a5s
Loop closure and intersubunit communication in tryptophan synthase.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
K87 T110 A112 G113 Q114 H115 G303
Binding residue
(residue number reindexed from 1)
K85 T108 A110 G111 Q112 H113 G301
Annotation score
5
Enzymatic activity
Enzyme Commision number
4.2.1.20
: tryptophan synthase.
Gene Ontology
Molecular Function
GO:0004834
tryptophan synthase activity
GO:0005515
protein binding
GO:0016829
lyase activity
GO:0042802
identical protein binding
Biological Process
GO:0000162
tryptophan biosynthetic process
GO:0006568
tryptophan metabolic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1a5s
,
PDBe:1a5s
,
PDBj:1a5s
PDBsum
1a5s
PubMed
9548921
UniProt
P0A2K1
|TRPB_SALTY Tryptophan synthase beta chain (Gene Name=trpB)
[
Back to BioLiP
]