Structure of PDB 8xjv Chain At Binding Site BS02

Receptor Information
>8xjv Chain At (length=123) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MAKSAPAPKKGSKKAVTKTQKKDGKKRRKSRKESYAIYVYKVLKQVHPDT
GISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLL
PGELAKHAVSEGTKAVTKYTSAK
Ligand information
>8xjv Chain Av (length=2112) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
actggaacaggatgtatatatgtgacacgtgcctggagactagggagtaa
tccccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcg
gtgctagagctgtctacgaccaattgagcggcctcggcaccgggattctc
caggggatccggatgctcgggtccggcactggaacaggatgtatatatgt
gacacgtgcctggagactagggagtaatccccttggcggttaaaacgcgg
gggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacgaccaa
ttgagcggcctcggcaccgggattctccaggggatccggatgctcgggtc
cggcactggaacaggatgtatatatgtgacacgtgcctggagactaggga
gtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgcgttta
agcggtgctagagctgtctacgaccaattgagcggcctcggcaccgggat
tctccaggggatccggatgctcgggtccggcactggaacaggatgtatat
atgtgacacgtgcctggagactagggagtaatccccttggcggttaaaac
gcgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacga
ccaattgagcggcctcggcaccgggattctccaggggatccggatgctcg
ggtccggcactggaacaggatgtatatatgtgacacgtgcctggagacta
gggagtaatccccttggcggttaaaacgcgggggacagcgcgtacgtgcg
tttaagcggtgctagagctgtctacgaccaattgagcggcctcggcaccg
ggattctccaggggatccggatgctcgggtccggcactggaacaggatgt
atatatgtgacacgtgcctggagactagggagtaatccccttggcggtta
aaacgcgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtct
acgaccaattgagcggcctcggcaccgggattctccaggggatccggatg
ctcgggtccggcactggaacaggatgtatatatgtgacacgtgcctggag
actagggagtaatccccttggcggttaaaacgcgggggacagcgcgtacg
tgcgtttaagcggtgctagagctgtctacgaccaattgagcggcctcggc
accgggattctccaggggatccggatgctcgggtccggcactggaacagg
atgtatatatgtgacacgtgcctggagactagggagtaatccccttggcg
gttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctagagct
gtctacgaccaattgagcggcctcggcaccgggattctccaggggatccg
gatgctcgggtccggcactggaacaggatgtatatatgtgacacgtgcct
ggagactagggagtaatccccttggcggttaaaacgcgggggacagcgcg
tacgtgcgtttaagcggtgctagagctgtctacgaccaattgagcggcct
cggcaccgggattctccaggggatccggatgctcgggtccggcactggaa
caggatgtatatatgtgacacgtgcctggagactagggagtaatcccctt
ggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctag
agctgtctacgaccaattgagcggcctcggcaccgggattctccagggga
tccggatgctcgggtccggcactggaacaggatgtatatatgtgacacgt
gcctggagactagggagtaatccccttggcggttaaaacgcgggggacag
cgcgtacgtgcgtttaagcggtgctagagctgtctacgaccaattgagcg
gcctcggcaccgggattctccaggggatccggatgctcgggtccggcact
ggaacaggatgtatatatgtgacacgtgcctggagactagggagtaatcc
ccttggcggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtg
ctagagctgtctacgaccaattgagcggcctcggcaccgggattctccgg
atccggatgctc
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		K8 K9 G10 S11 K12 R26 R27 K28 R30 Y39 S52 S53 S84 T85
Binding residue
(residue number reindexed from 1)		K9 K10 G11 S12 K13 R27 R28 K29 R31 Y40 S53 S54 S85 T86
External links
PDB RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum8xjv
PubMed39103524
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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