Structure of PDB 3jbn Chain Ac Binding Site BS02

Receptor Information

>3jbn Chain Ac (length=89) Species: 36329 (Plasmodium falciparum 3D7)

GKAGKGTGSFGKRNGKTHFLCLRCGKRSYHLQKKKCASCGYPSAKKRRFN
WSVKAKRRNTTGTGRCRYIKTLRRKLKNKFTEGSTPKPK

Ligand information

>3jbn Chain AC (length=151)

agcacagucuuaacgauggaugucuugguuccuacagcgaugaaggccgc
agcaaaaugcgauacgcaaugaaaauugcagugacugaaucaucagaaug
cugaauguaaacuacaccaauucccugggaauagugguacuccuacagaa
a

............................................<<<<<<
<<<....>>>>.....(.<<<<.....>>..........>>>>..)...>
>>....<<.....>><<<<<<<<<<.>>>>>>..>>>>............
.

Receptor-Ligand Complex Structure

Structure summary

• PDB: 3jbn Dynamical features of the Plasmodium falciparum ribosome during translation.
• Resolution: 4.7 Å
• Binding residue (original residue number in PDB): F20 R24 C25 Y30 K35 Y42 A45 N60 T61 T62 G63 T64 G65 R66 C67 R68 Y69 I70 R75 K76 K78 N79 F81 G84 S85 T86 P87 K90
• Binding residue (residue number reindexed from 1): F19 R23 C24 Y29 K34 Y41 A44 N59 T60 T61 G62 T63 G64 R65 C66 R67 Y68 I69 R74 K75 K77 N78 F80 G83 S84 T85 P86 K89

Gene Ontology

Molecular Function

• GO:0003723 RNA binding
• GO:0003735 structural constituent of ribosome
• GO:0019843 rRNA binding
• GO:0046872 metal ion binding

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:0022625 cytosolic large ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:3jbn, PDBe:3jbn, PDBj:3jbn
• PDBsum: 3jbn
• PubMed: 26432834
• UniProt: C0H4L5