Structure of PDB 6n1d Chain AL28 Binding Site BS02

Receptor Information
>6n1d Chain AL28 (length=88) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRVRVAGQE
ITFRVAASHIPKVYELVERAKGLRLEGLSPKEIKKELL
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6n1d Chain AL28 Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6n1d Spontaneous ribosomal translocation of mRNA and tRNAs into a chimeric hybrid state.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		G29 V30
Binding residue
(residue number reindexed from 1)		G22 V23
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:6n1d, PDBe:6n1d, PDBj:6n1d
PDBsum6n1d
PubMed30936299
UniProtQ72G84|RL28_THET2 Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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