Structure of PDB 7mpi Chain AJ Binding Site BS02
Receptor Information
>7mpi Chain AJ (length=169) Species:
4932
(Saccharomyces cerevisiae) [
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QNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVR
TFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFG
IDEHIDLGIKYDPSIGIFGMDFYVVMNRPGARVTRRKRCKGTVGNSHKTT
KEDTVSWFKQKYDADVLDK
Ligand information
>7mpi Chain A3 (length=121) [
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gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacugu
aguuaagcugguaagagccugaccgaguaguguagugggugaccauacgc
gaaacucaggugcugcaaucu
<<<<<<<<<....<<<<<<<<.....<<.<<<............>>>...
.>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>
.....>>>>>>>>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB
7mpi
CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations.
Resolution
3.05 Å
Binding residue
(original residue number in PDB)
N7 M9 R10 Q43 T44 V46 H68 V69 T70 R72 G135 R137 R141 R143 G149 N150 H152
Binding residue
(residue number reindexed from 1)
N2 M4 R5 Q38 T39 V41 H63 V64 T65 R67 G130 R132 R136 R138 G144 N145 H147
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0000027
ribosomal large subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Cellular Component
External links
PDB
RCSB:7mpi
,
PDBe:7mpi
,
PDBj:7mpi
PDBsum
7mpi
PubMed
35489333
UniProt
P0C0W9
|RL11A_YEAST Large ribosomal subunit protein uL5A (Gene Name=RPL11A)
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