Structure of PDB 6yrv Chain AAA Binding Site BS02

Receptor Information
>6yrv Chain AAA (length=573) Species: 554065 (Chlorella variabilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPVAGQKYDYILVGGGTAACVLANRLSADGSKRVLVLEAGPDNTSRDVKI
PAAITRLFRSPLDWNLFSELQEQLAERQIYMARGRLLGGSSATNATLYHR
GAAGDYDAWGVEGWSSEDVLSWFVQAETNADFGPGAYHGSGGPMRVENPR
YTNKQLHTAFFKAAEEVGLTPNSDFNDWSHDHAGYGTFQVMQDKGTRADM
YRQYLKPVLGRRNLQVLTGAAVTKVNIDQAAGKAQALGVEFSTDGPTGER
LSAELAPGGEVIMCAGAVHTPFLLKHSGVGPSAELKEFGIPVVSNLAGVG
QNLQDQPACLTAAPVKEKYDGIAISDHIYNEKGQIRKRAIASYLLGGRGG
LTSTGCDRGAFVRTAGQALPDLQVRFVPGMALDPDGVSTYVRFAKFQSQG
LKWPSGITMQLIACRPQSTGSVGLKSADPFAPPKLSPGYLTDKDGADLAT
LRKGIHWARDVARSSALSEYLDGELFPGSGVVSDDQIDEYIRRSIHSSNA
ITGTCKMGNAGDSSSVVDNQLRVHGVEGLRVVDASVVPKIPGGQTGAPVV
MIAERAAALLTGKATIGASAAAP
Ligand information
Ligand IDPJ8
InChIInChI=1S/C17H36/c1-3-5-7-9-11-13-15-17-16-14-12-10-8-6-4-2/h3-17H2,1-2H3
InChIKeyNDJKXXJCMXVBJW-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385
OpenEye OEToolkits 2.0.7		CCCCCCCCCCCCCCCCC
FormulaC17 H36
Nameheptadecane
ChEMBLCHEMBL3185332
DrugBank
ZINCZINC000008217397
PDB chain6yrv Chain AAA Residue 802 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6yrv Mechanism and dynamics of fatty acid photodecarboxylase.
Resolution1.94 Å
Binding residue
(original residue number in PDB)		V453 G455 M456 G462 T465 Y466 F469 T484 Q486
Binding residue
(residue number reindexed from 1)		V377 G379 M380 G386 T389 Y390 F393 T408 Q410
Annotation score5
Enzymatic activity
Enzyme Commision number 4.1.1.106: fatty acid photodecarboxylase.
Gene Ontology
Molecular Function
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0050660 flavin adenine dinucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:6yrv, PDBe:6yrv, PDBj:6yrv
PDBsum6yrv
PubMed33833098
UniProtA0A248QE08|FAP_CHLVA Fatty acid photodecarboxylase, chloroplastic (Gene Name=FAP)

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