Structure of PDB 9clp Chain A Binding Site BS02

Receptor Information
>9clp Chain A (length=420) Species: 40353 (Echis carinatus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ERKFEKKFIELVVVVDHSMVTKYNNDSTAIRTWIYEMLNTVNEIYLPFNI
RVALVGLEFWCNGDLINVTSTADDTLHSFGEWRASDLLNRKRHDHAQLLT
NVTLDHSTLGITFVYGMCKSDRSVELILDYSNITFNMAYIIAHEMGHSLG
MLHDTKFCTCGAKPCIMFGKESIPPPKEFSSCSYDQYNKYLLKYNPKCIL
DPPLRKDIASPAVCGNEIWEEGEECDCGSPADCRNPCCDAATCKLKPGAE
CGNGECCDKCKIRKAGTECRPARDDCDVAEHCTGQSAECPRNEFQRNGQP
CLNNSGYCYNGDCPIMLNQCIALFSPSATVAQDSCFQRNLQGSYYGYCTK
EIGYYGKRFPCAPQDVKCGRLYCLDNSFKKNMRCKNDYSYADENKGIVEP
GTKCEDGKVCINRKCVDVNT
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain9clp Chain A Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB9clp Importance of the Cysteine-Rich Domain of Snake Venom Prothrombin Activators: Insights Gained from Synthetic Neutralizing Antibodies.
Resolution3.43 Å
Binding residue
(original residue number in PDB)		V407 N410 I412 E414 E417 D420
Binding residue
(residue number reindexed from 1)		V213 N216 I218 E220 E223 D226
Annotation score4
External links
PDB RCSB:9clp, PDBe:9clp, PDBj:9clp
PDBsum9clp
PubMed39195771
UniProtQ90495|VM3E_ECHCA Zinc metalloproteinase-disintegrin-like ecarin

[Back to BioLiP]