Structure of PDB 9bcu Chain A Binding Site BS02

Receptor Information
>9bcu Chain A (length=900) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKKVIGSIEFGILSPQEIRKMSAAEITVPDTYDDDGYPIEGGLMDKRLGV
IDPGLRCETCGARAGECPGHFGHIELARPVIHVGFAKTIHRVLESTCREC
GRIKLTDEEIEEYMQKFEVMGDRKGAVDKLIKEIHKKAKERMVCPHCGAP
QFPIKFERPTIYWELRKDEEGNEYKHRMMPSEVRDRLEKIPDKDLPLLGL
HPEKSRPEWMVLTVLPVPPVTMRPSITLESGIRAEDDLTHKLVDIIRINN
RLKSNIEAGAPQLIIEDLWDLLQYHVTTYINNETSGVPPAKHKSGRPLKT
LAQRLKGKEGRFRGNLSGKRVNFSARTVISPDPMISINEVGVPLAVAMEL
TVPEKVTEFNYEKLKQRVLNGPEKYPGANYVIDPEGRRIRLMESNRELIA
EKLDIGWTVERHLEDGDVVLFNRQPSLHRMSIMAHRVRVMPYRTFRLNLP
VCPPYNADFDGDEMNLHVPQTEEAQAEAKILMEVQNHIISPRYGGPLIAG
IQDHISGGYLLTREGAYFTRYEVEQMLMFAGMDVNELPEPDKYENGEPLW
SGKTIFSLLLPDDLTIWYRNKLCDEPERCEALEKLIEEKLIPDPEEVRKL
AYDGFVYIQNGKLLSGAVDKKAYGREDGKLLDIIVREYGVERARQFLDQV
TKLTIWVITHKGFTTAIDDEDLPQEAIDRIHEIIREAEEKVQRLIEAYKR
GELEPLPGKTLEETLESKIMAVLAEARDNAGKVAERYLGMNNHAVIMAKT
GARGKILNITQMAAMLGQQSIRGKRLYRGYRGRVLTHFKPGDLGARARGF
VTNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGYMQRRLINALQDLK
VDYDGTVRDPTGIIVQFKYGEDGVDPMKSWQGKTVDVDRVIVRTLLKMRG
Ligand information
Receptor-Ligand Complex Structure
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PDB9bcu Structural basis of archaeal FttA-dependent transcription termination
Resolution2.2 Å
Binding residue
(original residue number in PDB)		R161 L231 S288 K296 K311 R316 R323 R329 Q427 P428 T835 A836 G839 Y840
Binding residue
(residue number reindexed from 1)		R158 L228 S285 K293 K308 R313 R320 R326 Q424 P425 T832 A833 G836 Y837
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0008270 zinc ion binding
GO:0016779 nucleotidyltransferase activity
GO:0034062 5'-3' RNA polymerase activity
GO:0046872 metal ion binding
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:9bcu, PDBe:9bcu, PDBj:9bcu
PDBsum9bcu
PubMed
UniProtQ5JE33

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