Structure of PDB 8yv8 Chain A Binding Site BS02

Receptor Information
>8yv8 Chain A (length=97) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS
AVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Ligand information
>8yv8 Chain J (length=132) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tctgacacgtgcctggagactagggagtaatccccttggcggttaaaacg
cgggggacagcgcgtacgtgcgtttaagcggtgctagagctgtctacgac
caattgagcggcctcgcgaccgggattctgat
Receptor-Ligand Complex Structure
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PDB8yv8 CDCA7 is a hemimethylated DNA adaptor for the nucleosome remodeler HELLS
Resolution3.0 Å
Binding residue
(original residue number in PDB)		R40 V46 K64 L65 P66 R69
Binding residue
(residue number reindexed from 1)		R3 V9 K27 L28 P29 R32
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0045296 cadherin binding
Biological Process
GO:0006325 chromatin organization
GO:0006334 nucleosome assembly
GO:0010467 gene expression
GO:0032200 telomere organization
GO:0040029 epigenetic regulation of gene expression
Cellular Component
GO:0000786 nucleosome
GO:0005576 extracellular region
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0016020 membrane
GO:0032991 protein-containing complex
GO:0070062 extracellular exosome

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Cellular Component
External links
PDB RCSB:8yv8, PDBe:8yv8, PDBj:8yv8
PDBsum8yv8
PubMed
UniProtP68431|H31_HUMAN Histone H3.1 (Gene Name=H3C1)

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