Structure of PDB 8yd3 Chain A Binding Site BS02

Receptor Information
>8yd3 Chain A (length=154) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHE
FGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSI
EDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVI
GIAQ
Ligand information
Ligand IDA1LYN
InChIInChI=1S/C10H22O3/c11-8-6-4-2-1-3-5-7-10(13)9-12/h10-13H,1-9H2/t10-/m0/s1
InChIKeyRHINSRUDDXGHLV-JTQLQIEISA-N
SMILES
SoftwareSMILES
CACTVS 3.385OCCCCCCCC[CH](O)CO
OpenEye OEToolkits 2.0.7C(CCCCO)CCCC(CO)O
OpenEye OEToolkits 2.0.7C(CCCCO)CCC[C@@H](CO)O
CACTVS 3.385OCCCCCCCC[C@H](O)CO
FormulaC10 H22 O3
Name(2S)-decane-1,2,10-triol
ChEMBL
DrugBank
ZINC
PDB chain8yd3 Chain A Residue 203 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8yd3 Crystal structure of human Cu-Zn Superoxide Dismutase 1 in complex with 1,2,10-Decanetriol
Resolution1.96 Å
Binding residue
(original residue number in PDB)		V7 Q15 I17 S34
Binding residue
(residue number reindexed from 1)		V8 Q16 I18 S35
Annotation score1
External links
PDB RCSB:8yd3, PDBe:8yd3, PDBj:8yd3
PDBsum8yd3
PubMed
UniProtP00441|SODC_HUMAN Superoxide dismutase [Cu-Zn] (Gene Name=SOD1)

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