Structure of PDB 8vfx Chain A Binding Site BS02

Receptor Information
>8vfx Chain A (length=97) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS
SAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE
Ligand information
>8vfx Chain J (length=158) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atctttcctattgctttaaaggcagaggactgtattgatcagtccaaact
tctttctgcatgtacatggaaaactggccaaggcaaacacgtccggaatg
atggtatttaagaacaaacattccctggtatcagcaagtacagtgccctg
ctgacaga
Receptor-Ligand Complex Structure
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PDB8vfx Cryo-EM structure of 186bp ALBN1 nucleosome aided by scFv
Resolution2.65 Å
Binding residue
(original residue number in PDB)
K37 Y41 R42 T45 R72 R83 F84 Q85 R116 V117 T118 M120
Binding residue
(residue number reindexed from 1)
K1 Y5 R6 T9 R36 R47 F48 Q49 R80 V81 T82 M84
External links
PDB RCSB:8vfx, PDBe:8vfx, PDBj:8vfx
PDBsum8vfx
PubMed39121853
UniProtP68431|H31_HUMAN Histone H3.1 (Gene Name=H3C1)

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