Structure of PDB 8v3p Chain A Binding Site BS02

Receptor Information
>8v3p Chain A (length=462) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELRCGGLLFSSRFDSGNLAHVEKVESLSSPDYEFNVWTRPDCAETEFENG
NRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQ
LDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDR
EPRLEQLFPDTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFIL
RPDDPRAQTLRRLFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDA
VLHPAIYGAKAVLLYHHVSGGSGVAYYVDLHGHASKRGCFMYGNSFSDES
TQVENMLYPKLISLNSAHFDFQGCNFSEKNMYARQSKEGSGRVAIYKASG
IIHSYTLACNYNTYTVELFEQVGRAMAIAALDMAECNPWPRIVLSSLTNL
RAWMLKHVRNSR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8v3p Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8v3p Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Resolution2.36 Å
Binding residue
(original residue number in PDB)
H252 E255 H434
Binding residue
(residue number reindexed from 1)
H232 E235 H331
Annotation score1
External links
PDB RCSB:8v3p, PDBe:8v3p, PDBj:8v3p
PDBsum8v3p
PubMed39020174
UniProtQ8NDL9|CBPC5_HUMAN Cytosolic carboxypeptidase-like protein 5 (Gene Name=AGBL5)

[Back to BioLiP]