Structure of PDB 8v3o Chain A Binding Site BS02

Receptor Information
>8v3o Chain A (length=471) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELRCGGLLFSSRFDSGNLAHVEKVESLSSPDYEFNVWTRPDCAETEFENG
NRSWFYFSVRGGMPGKLIKINIMNMNKQSKLYSQGMAPFVRTLPTRPRWE
RIRDRPTFEMTETQFVLSFVHRFVEGRGATTFFAFCYPFSYSDCQELLNQ
LDQRFPENHPTHSSPLDTIYYHRELLCYSLDGLRVDLLTITSCHGLREDR
EPRLEQLFPDTSTPRPFRFAGKRIFFLSSRVHPGETPSSFVFNGFLDFIL
RPDDPRAQTLRRLFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLKPDA
VLHPAIYGAKAVLLYHHVSGSGSGVAYYVDLHGHASKRGCFMYGNSFSDE
STQVENMLYPKLISLNSAHFDFQGCNFSEKNMYARDRRDGQSKEGSGRVA
IYKASGIIHSYTLACNYNTGTVELFEQVGRAMAIAALDMAECNPWPRIVL
SEHSSLTNLRAWMLKHVRNSR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8v3o Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8v3o Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Resolution2.3 Å
Binding residue
(original residue number in PDB)
H252 E255 H434
Binding residue
(residue number reindexed from 1)
H232 E235 H332
Annotation score1
External links
PDB RCSB:8v3o, PDBe:8v3o, PDBj:8v3o
PDBsum8v3o
PubMed39020174
UniProtQ8NDL9|CBPC5_HUMAN Cytosolic carboxypeptidase-like protein 5 (Gene Name=AGBL5)

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