Structure of PDB 8tlr Chain A Binding Site BS02

Receptor Information
>8tlr Chain A (length=158) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTEYKLVVVGACGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGET
CLLDILDTARDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDD
VPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYT
LVREIRQH
Ligand information
Ligand IDMOV
InChIInChI=1S/C30H32F2N6O3/c1-6-23(40)36-12-13-37(18(5)15-36)28-19-14-21(32)26(24-20(31)8-7-9-22(24)39)34-29(19)38(30(41)35-28)27-17(4)10-11-33-25(27)16(2)3/h7-11,14,16,18,39H,6,12-13,15H2,1-5H3/t18-/m0/s1
InChIKeyZIXPBHVQXGLHAG-SFHVURJKSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCC(=O)N1CCN(C(C1)C)C2=NC(=O)N(c3c2cc(c(n3)c4c(cccc4F)O)F)c5c(ccnc5C(C)C)C
OpenEye OEToolkits 2.0.7CCC(=O)N1CCN([C@H](C1)C)C2=NC(=O)N(c3c2cc(c(n3)c4c(cccc4F)O)F)c5c(ccnc5C(C)C)C
CACTVS 3.385CCC(=O)N1CCN([C@@H](C)C1)C2=NC(=O)N(c3nc(c(F)cc23)c4c(O)cccc4F)c5c(C)ccnc5C(C)C
CACTVS 3.385CCC(=O)N1CCN([CH](C)C1)C2=NC(=O)N(c3nc(c(F)cc23)c4c(O)cccc4F)c5c(C)ccnc5C(C)C
ACDLabs 12.01CC1N(CCN(C1)C(=O)CC)C3=NC(=O)N(c2c(nccc2C)C(C)C)c4c3cc(F)c(n4)c5c(F)cccc5O
FormulaC30 H32 F2 N6 O3
NameAMG 510 (bound form);
6-fluoro-7-(2-fluoro-6-hydroxyphenyl)-4-[(2S)-2-methyl-4-propanoylpiperazin-1-yl]-1-[4-methyl-2-(propan-2-yl)pyridin-3-yl]pyrido[2,3-d]pyrimidin-2(1H)-one
ChEMBL
DrugBank
ZINC
PDB chain8tlr Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8tlr Targeting Ras-, Rho-, and Rab-Family GTPases via a Conserved Cryptic Pocket
Resolution1.70004 Å
Binding residue
(original residue number in PDB)
V9 C12 K16 A59 R68 M72 Q95 Y96 Q99 V103
Binding residue
(residue number reindexed from 1)
V9 C12 K16 A59 R60 M64 Q87 Y88 Q91 V95
Annotation score1
External links
PDB RCSB:8tlr, PDBe:8tlr, PDBj:8tlr
PDBsum8tlr
PubMed39255801
UniProtP01112|RASH_HUMAN GTPase HRas (Gene Name=HRAS)

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