Structure of PDB 8spo Chain A Binding Site BS02
Receptor Information
>8spo Chain A (length=407) Species:
429344
(Maribacter polysiphoniae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQIFLHDKSVIEKEEIYDSNWLSILSFPEELRFHEYNWMLPKRFDVR
ELTFPAVRYKNYLCTFAWAYDFTYHLPKTETYHKSKTIRIPTEEILSGSY
DSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEMLVGK
QKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKKLIDSSSVQHSSRRR
QGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEEKVFVSNEPVKFKGN
VSYNIPE
Ligand information
>8spo Chain D (length=18) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aatagattagagccgtca
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8spo
Oligomerization-mediated activation of a short prokaryotic Argonaute.
Resolution
2.98 Å
Binding residue
(original residue number in PDB)
R201 R263 K328 H358 R362
Binding residue
(residue number reindexed from 1)
R200 R262 K315 H345 R349
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0007165
signal transduction
View graph for
Biological Process
External links
PDB
RCSB:8spo
,
PDBe:8spo
,
PDBj:8spo
PDBsum
8spo
PubMed
37494956
UniProt
A0A316E683
[
Back to BioLiP
]