Structure of PDB 8s94 Chain A Binding Site BS02

Receptor Information
>8s94 Chain A (length=328) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EFSLKDLYAIQEIQAEENLFKLIVNSLCPVIFGHELVKAGLALALFGGSQ
KYADDKNRIPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGVYVCGNTTT
TSGLTVTAGALVLGDQGICGIDQFDKMGNQHQALLEAMEQQSISLAKAGV
VCSLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDT
PNEHHDHLLSEHVIAIRAKPLSERLKVVPGETIDPIPHQLLRKYIGYARQ
YVYPRLSTEAARVLQDFYLELRKQSQRLNSSPITTRQLESLIRLTEARAR
LELREEATKEDAEDIVEIMKYSMLGTYS
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8s94 Chain A Residue 2002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8s94 Activity, substrate preference and structure of the HsMCM8/9 helicase.
Resolution3.94 Å
Binding residue
(original residue number in PDB)		S461 D518
Binding residue
(residue number reindexed from 1)		S78 D122
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.4.12: DNA helicase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003682 chromatin binding
GO:0003697 single-stranded DNA binding
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0017116 single-stranded DNA helicase activity
GO:0019899 enzyme binding
GO:0032406 MutLbeta complex binding
GO:0032407 MutSalpha complex binding
GO:0032408 MutSbeta complex binding
Biological Process
GO:0000724 double-strand break repair via homologous recombination
GO:0006139 nucleobase-containing compound metabolic process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006974 DNA damage response
GO:0007292 female gamete generation
GO:0032508 DNA duplex unwinding
GO:0036298 recombinational interstrand cross-link repair
GO:0048232 male gamete generation
GO:0050821 protein stabilization
GO:0070716 mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication
GO:0071168 protein localization to chromatin
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome
GO:0042555 MCM complex
GO:0097362 MCM8-MCM9 complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8s94, PDBe:8s94, PDBj:8s94
PDBsum8s94
PubMed37309874
UniProtQ9UJA3|MCM8_HUMAN DNA helicase MCM8 (Gene Name=MCM8)

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