Structure of PDB 8rsj Chain A Binding Site BS02

Receptor Information
>8rsj Chain A (length=262) Species: 66851 (Methanobrevibacter oralis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPMNNDEQLEFLINYLLDERSESIDIPKTFSEKRNLLRSLMNMRHPSNIS
EEFLRIQDEFLSRETANKNLTSVEDISLSSGKIMLWQGDITTLSADAIVN
AANSKLLGCFIPMHNCIDNIIHSASGLQLREECNRMIMLQGGDEDVGKAK
ITNAYNLPSKYVVHTVGPSIERGMRVSSDDVKKLERCYNSCLELASEYKL
NSIAFCCISTGVFNFPQKKAAEIAIRTVKDFLNSNETSLNHIIFDVFTDK
DYDIYKKLLFGN
Ligand information
Ligand IDJNT
InChIInChI=1S/C15H25N5O14P2/c16-13-9-14(18-4-17-13)20(5-19-9)15-12(26)11(25)8(33-15)3-32-36(29,30)34-35(27,28)31-2-7(23)10(24)6(22)1-21/h4-8,10-12,15,21-26H,1-3H2,(H,27,28)(H,29,30)(H2,16,17,18)/t6-,7+,8+,10-,11+,12+,15+/m0/s1
InChIKeyQKJRZYRQRSLXSV-AOOZFPJJSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@H]([C@H]([C@H](CO)O)O)O)O)O)N
CACTVS 3.385Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH](O)[CH](O)[CH](O)CO)[CH](O)[CH]3O
CACTVS 3.385Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@@H](O)[C@@H](O)[C@@H](O)CO)[C@@H](O)[C@H]3O
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC(C(C(CO)O)O)O)O)O)N
FormulaC15 H25 N5 O14 P2
Name[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{S})-2,3,4,5-tetrakis(oxidanyl)pentyl] hydrogen phosphate
ChEMBL
DrugBank
ZINC
PDB chain8rsj Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8rsj Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains
Resolution1.66 Å
Binding residue
(original residue number in PDB)
D87 I88 A99 N101 C114 I115 D116 C205 S207 T208 G209 V210 F211 F245
Binding residue
(residue number reindexed from 1)
D89 I90 A101 N103 C116 I117 D118 C207 S209 T210 G211 V212 F213 F247
Annotation score1
External links