Structure of PDB 8qmn Chain A Binding Site BS02
Receptor Information
>8qmn Chain A (length=356) Species:
243274
(Thermotoga maritima MSB8) [
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MWSHPQFEKASTGREILEKLERREFTREVLKEALSINDRGFNEALFKLAD
EIRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIV
ERARLAVQFGAKTIVLQSGEDPYYMPDVISDIVKEIKKMGVAVTLSLGEW
PREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKEL
GYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLAN
EKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVI
IPNWTPSPYRQLYQLYPGKISVFEKDTASIPSVMKMIELLGRKPGRDWGG
RKRVFE
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
8qmn Chain A Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
8qmn
Maturation of the [FeFe]-Hydrogenase: Direct Transfer of the ( kappa 3-cysteinate)FeII(CN)(CO)2 Complex-B from HydG to HydE.
Resolution
1.48 Å
Binding residue
(original residue number in PDB)
C63 K65 C67 C70
Binding residue
(residue number reindexed from 1)
C73 K75 C77 C80
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.8.-.-
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0016491
oxidoreductase activity
GO:0016740
transferase activity
GO:0046872
metal ion binding
GO:0051536
iron-sulfur cluster binding
GO:0051537
2 iron, 2 sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0042364
water-soluble vitamin biosynthetic process
GO:0044272
sulfur compound biosynthetic process
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Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8qmn
,
PDBe:8qmn
,
PDBj:8qmn
PDBsum
8qmn
PubMed
37962296
UniProt
Q9X0Z6
|HYDE_THEMA [FeFe] hydrogenase maturase subunit HydE (Gene Name=TM_1269)
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