Structure of PDB 8qcn Chain A Binding Site BS02

Receptor Information
>8qcn Chain A (length=283) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGD
IRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPV
GGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHA
AFAEGVGEILTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIE
TLLKCEFSNDCEVIARKRFREVDAVLSWLLEYAPSRLTGTGACVFAEFDT
ESEARQVLEQAPEWLNGFVAKGVNLSPLHRAML
Ligand information
Ligand IDQB9
InChIInChI=1S/C10H12N4O3S/c11-9-7(6-12-10(15)14-9)2-1-5-13-18(16,17)8-3-4-8/h6,8,13H,3-5H2,(H3,11,12,14,15)
InChIKeyIMYCWWNWNOANBE-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385NC1=NC(=O)NC=C1C#CCN[S](=O)(=O)C2CC2
OpenEye OEToolkits 2.0.7C1CC1S(=O)(=O)NCC#CC2=CNC(=O)N=C2N
FormulaC10 H12 N4 O3 S
Name~{N}-[3-(4-azanyl-2-oxidanylidene-1~{H}-pyrimidin-5-yl)prop-2-ynyl]cyclopropanesulfonamide;
N-(3-(4-amino-2-oxo-1,2-dihydropyrimidin-5-yl)prop-2-yn-1-yl)cyclopropanesulfonamide
ChEMBL
DrugBank
ZINC
PDB chain8qcn Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qcn E.coli IspE in complex with a ligand (2)
Resolution1.86 Å
Binding residue
(original residue number in PDB)
N12 Y25 H26 F32 A140 D141 V156 F185 G239
Binding residue
(residue number reindexed from 1)
N12 Y25 H26 F32 A140 D141 V156 F185 G239
Annotation score1
External links
PDB RCSB:8qcn, PDBe:8qcn, PDBj:8qcn
PDBsum8qcn
PubMed
UniProtB7LXC3|ISPE_ECO8A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (Gene Name=ispE)

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