Structure of PDB 8q41 Chain A Binding Site BS02
Receptor Information
>8q41 Chain A (length=427) Species:
509193
(Thermoanaerobacter brockii subsp. finnii Ako-1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EKVLVLIVGTNPLPNYVVGSHLKEKYDKFVLIYSEKNDKINQNSTYDYAK
KLKEHLNLNDKCIFLPLSDVSNSEKIINDLREKFPSEDFVEVHLNYTGGT
KTMVVHIYNFLKEKFIKFEGSYLDARDYKLVYDYSEEAISLKDTIKIDIN
TLLSIHLYEDIHFEFYDTYSYKQKFVDSFDKISQEIEKAIKDDKGEDFVK
WLEDPFRKIFKGENKLLEKTAKFKKHIEKLLSSPIVKFNEKTPQFIWDIL
NAFPEGKKLNDGQKLWIPDDKITNDNLSSRVKDTVEFLNGKWFEWYVYSQ
IKSELLDRKLKEGEHFGISLKAQKKDSPYFALDIFLINGYQLIGISLTTS
STRELCKLKGFEVIHRVRQIGGDESKAILITGMDKSKTEDLQKDLAYETG
STQKRFVVFGIDDWADIGSKICEEVFK
Ligand information
>8q41 Chain X (length=4) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaaa
....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8q41
Substrate selectivity and catalytic activation of the type III CRISPR-associated ancillary nuclease Can2
Resolution
2.38 Å
Binding residue
(original residue number in PDB)
G11 T12 N13 P16 S36 T47 T99 G101 T102 K103 Y128 L129 A131 R132 E384 T409 G410
Binding residue
(residue number reindexed from 1)
G9 T10 N11 P14 S34 T45 T97 G99 T100 K101 Y122 L123 A125 R126 E374 T399 G400
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
GO:0046872
metal ion binding
View graph for
Molecular Function
External links
PDB
RCSB:8q41
,
PDBe:8q41
,
PDBj:8q41
PDBsum
8q41
PubMed
38033326
UniProt
E8URK0
[
Back to BioLiP
]