Structure of PDB 8otm Chain A Binding Site BS02
Receptor Information
>8otm Chain A (length=268) Species:
1773
(Mycobacterium tuberculosis) [
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TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT
DRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQT
GMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDP
SRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA
IVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLP
ATTGDIIYADGGAHTQLL
Ligand information
Ligand ID
VZI
InChI
InChI=1S/C26H20N4O5/c31-22-12-17(10-11-24(22)34-20-7-2-1-3-8-20)15-30-16-19(28-29-30)14-27-25(32)21-13-18-6-4-5-9-23(18)35-26(21)33/h1-13,16,31H,14-15H2,(H,27,32)
InChIKey
VYCONRDQVKDCGH-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
Oc1cc(Cn2cc(CNC(=O)C3=Cc4ccccc4OC3=O)nn2)ccc1Oc5ccccc5
OpenEye OEToolkits 2.0.7
c1ccc(cc1)Oc2ccc(cc2O)Cn3cc(nn3)CNC(=O)C4=Cc5ccccc5OC4=O
Formula
C26 H20 N4 O5
Name
2-oxidanylidene-~{N}-[[1-[(3-oxidanyl-4-phenoxy-phenyl)methyl]-1,2,3-triazol-4-yl]methyl]chromene-3-carboxamide
ChEMBL
DrugBank
ZINC
PDB chain
8otm Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
8otm
Discovery of new diaryl ether inhibitors against Mycobacterium tuberculosis targeting the minor portal of InhA.
Resolution
1.6 Å
Binding residue
(original residue number in PDB)
G96 F97 F149 M155 P156 A157 Y158 M161 A198 M199 I202 V203 Q214 L218
Binding residue
(residue number reindexed from 1)
G95 F96 F148 M154 P155 A156 Y157 M160 A197 M198 I201 V202 Q213 L217
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.3.1.9
: enoyl-[acyl-carrier-protein] reductase (NADH).
Gene Ontology
Molecular Function
GO:0004318
enoyl-[acyl-carrier-protein] reductase (NADH) activity
GO:0005504
fatty acid binding
GO:0016491
oxidoreductase activity
GO:0050343
trans-2-enoyl-CoA reductase (NADH) activity
GO:0070403
NAD+ binding
Biological Process
GO:0006633
fatty acid biosynthetic process
GO:0030497
fatty acid elongation
GO:0046677
response to antibiotic
GO:0071768
mycolic acid biosynthetic process
Cellular Component
GO:0005886
plasma membrane
GO:0009274
peptidoglycan-based cell wall
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8otm
,
PDBe:8otm
,
PDBj:8otm
PDBsum
8otm
PubMed
37482022
UniProt
P9WGR1
|INHA_MYCTU Enoyl-[acyl-carrier-protein] reductase [NADH] (Gene Name=inhA)
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