Structure of PDB 8kcm Chain A Binding Site BS02

Receptor Information
>8kcm Chain A (length=453) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PRGSHMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEA
NVPVVVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDP
GEKISRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVV
PCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTLSDVLETGVK
ALLPERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDP
TKNMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEIS
DNFCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPL
WNASQMELLSTGKMHGYTRMYWAKKILEWSESPEKALEIAICLNDRYELD
GRDPNGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIE
KYS
Ligand information
Receptor-Ligand Complex Structure
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PDB8kcm Visualizing the DNA repair process by a photolyase at atomic resolution
Resolution2.5 Å
Binding residue
(original residue number in PDB)		Y158 R429 A430 W431 G432 E433 K439
Binding residue
(residue number reindexed from 1)		Y161 R420 A421 W422 G423 E424 K430
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8kcm, PDBe:8kcm, PDBj:8kcm
PDBsum8kcm
PubMed38033054
UniProtQ8PYK9

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