Structure of PDB 8k87 Chain A Binding Site BS02

Receptor Information
>8k87 Chain A (length=468) Species: 35554 (Geobacter sulfurreducens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SQLAAHSTIPEPLLLFKDNRTDTHPLRGLSQYGPYSACFNLPGQVRLAYL
APTEHMRKLDAIVRELQNPATPKEATNYYVEYGGFEKVFKVPLVMPQEHL
RCLALDECHGVAANGNGLALADKIVQSMSGLFRQKHAFDVLLVYLPASWK
KCFEYDGFDLHDRIKAKVAPLNLPIQIINDTALTRQCRANVMWGVSVALY
AKAGGIPWKLADWDKDEAYIGLSYAIKKNAEGQEYTTCCSQVFDPDGTGF
EFVAYDTREFITDRKGNPYLSYQEMQSVLSKSLHLYQSSHNGRMPRKIFI
HKTTHFTEDEIQGAFDSFSSSTEIELVQIIQSTNWYGLKVDGKKGDKPVA
PASYPVDRGLYQPLTESECLLWTQGSVMGVNQQNPGQPVFKEAALTPLPN
PIMLRRFSGNGGWHATCSSILALTKVDWNNNTLYKKLPVTLVYSQVFADV
VKQTPEIVNEIYDYRFFM
Ligand information
>8k87 Chain D (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
auaaugguuucuuagacgucg
.....................
Receptor-Ligand Complex Structure
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PDB8k87 Structural Basis of prokaryotic Argonaute System
Resolution2.9 Å
Binding residue
(original residue number in PDB)		F158 D164 H166 Q181 I182 I183 N184 T186 A187 R190 V196 G199 V200 Y240 Y274 Q379 T401 N434 N435 N436 T437 K440 K441 M473
Binding residue
(residue number reindexed from 1)		F153 D159 H161 Q176 I177 I178 N179 T181 A182 R185 V191 G194 V195 Y235 Y269 Q374 T396 N429 N430 N431 T432 K435 K436 M468
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process

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Molecular Function
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Biological Process
External links
PDB RCSB:8k87, PDBe:8k87, PDBj:8k87
PDBsum8k87
PubMed38923459
UniProtQ74DF5

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