Structure of PDB 8ita Chain A Binding Site BS02

Receptor Information
>8ita Chain A (length=429) Species: 58944 (Iris domestica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTTVVLYPSPGMGHLVSMFELAKLLDRHGLSVTVIIVEPHGSTAAFIARS
SASNPSVSFRVLPRPEAHAFDLLRLSNPELRRFLLESPPSALVLDYFCGN
ALDVSAELRIPAYYFFTSGAGVLSAFLHFPDLHSRTAASFREMGSSPLHF
PGIPPLPADHMPVPMLDRDDPVYESFLYFSKRLKEAEGYIINTFEDLEPR
AVAAISDAALPPNYCIGPLIQSRGGSECLAWLDAQPKRSVVFLCFGSIGL
FSSEQLKEMAVGLERSGQRFLWVVRSPPSEPDLERILPEGFLERTEGRGL
VVKSWAPQAAVLEHGSVGGFVTHCGWNSTLEAIASGVPMVAWPMYAEQWM
NKVFLVEEMKLAVPMEGYDKDMVTAEEVERKVRWLMESEGGVELRARTER
AKERAAASLAEGGKSKVALLEVVERMKRG
Ligand information
Ligand IDUDP
InChIInChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKeyXCCTYIAWTASOJW-XVFCMESISA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O
CACTVS 3.370O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
CACTVS 3.370O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
OpenEye OEToolkits 1.7.0C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O
ACDLabs 12.01O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O
FormulaC9 H14 N2 O12 P2
NameURIDINE-5'-DIPHOSPHATE
ChEMBLCHEMBL130266
DrugBankDB03435
ZINCZINC000004490939
PDB chain8ita Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ita Functional characterization and structural basis of a reversible glycosyltransferase involves in plant chemical defence.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		C270 S273 W342 A343 Q345 H360 G362 N364 S365 E368 Y382
Binding residue
(residue number reindexed from 1)		C244 S247 W305 A306 Q308 H323 G325 N327 S328 E331 Y345
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 01:28:02 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8ita', asym_id = 'A', bs = 'BS02', title = 'Functional characterization and structural basis...yltransferase involves in plant chemical defence.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8ita', asym_id='A', bs='BS02', title='Functional characterization and structural basis...yltransferase involves in plant chemical defence.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008194,0035251', uniprot = '', pdbid = '8ita', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008194,0035251', uniprot='', pdbid='8ita', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>