Structure of PDB 8ila Chain A Binding Site BS02

Receptor Information
>8ila Chain A (length=429) Species: 1915 (Streptomyces lincolnensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRALAFVWLMVEGAQVAAGGVAGYVRNLLDEQDALRDHLAERGWSVEFVL
GEPFYDPGAPGYDEERWRRVREHLAARGGRAVRLVSDSDGLDGWGEERFF
HALSATGAQLVLDTAERCDAVVAVSGTSAFARVPGMVQRQGGELAAKVLH
VHTFGLATHDTAHVPSPAEIAADGDVAFWTRQSDRVSVGYISRYTAELYA
RTYAIPAAALLPNRSAIPRHAPRFGVLTEERINERIAGLGLPAEGEFVVM
WGRNSAPGLDKGYHLLLEAARDLPGVVPVIATRRPDPGLRRLADRYAVPA
VLLDDQPFTHLSALLQSPRTLAAAFLGEAEPGAVSPMEAMWVARESGALV
IAADTGNLPEVVDDGAAGIVTRRTAADVADAVRRVRKLTADERRRMRAAA
AARVRARFDFAANVRELADAAVDRLAEVS
Ligand information
Ligand IDQ3L
InChIInChI=1S/C17H30N4O7S/c1-7(22)10(18)14-12(24)11(23)13(25)16(28-14)29-17-19-6-8(20-17)5-9(15(26)27)21(2,3)4/h6-7,9-14,16,22-25H,5,18H2,1-4H3,(H-,19,20,26,27)/p+1/t7-,9+,10-,11+,12-,13-,14-,16+/m1/s1
InChIKeyMZDFOQLXMBUKGA-HNXDCMGUSA-O
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C[C@H]([C@H]([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)Sc2[nH]c(cn2)C[C@@H](C(=O)O)[N+](C)(C)C)O)O)O)N)O
OpenEye OEToolkits 2.0.7CC(C(C1C(C(C(C(O1)Sc2[nH]c(cn2)CC(C(=O)O)[N+](C)(C)C)O)O)O)N)O
CACTVS 3.385C[C@@H](O)[C@@H](N)[C@H]1O[C@@H](Sc2[nH]c(C[C@@H](C(O)=O)[N+](C)(C)C)cn2)[C@H](O)[C@@H](O)[C@H]1O
CACTVS 3.385C[CH](O)[CH](N)[CH]1O[CH](Sc2[nH]c(C[CH](C(O)=O)[N+](C)(C)C)cn2)[CH](O)[CH](O)[CH]1O
FormulaC17 H31 N4 O7 S
Name(2~{S})-3-[2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-[(1~{R},2~{R})-1-azanyl-2-oxidanyl-propyl]-3,4,5-tris(oxidanyl)oxan-2-yl]sulfanyl-1~{H}-imidazol-5-yl]-2-(trimethyl-$l^{4}-azanyl)propanoic acid
ChEMBL
DrugBank
ZINC
PDB chain8ila Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ila Structural Basis of Low-Molecular-Weight Thiol Glycosylation in Lincomycin A Biosynthesis.
Resolution2.79 Å
Binding residue
(original residue number in PDB)
G27 W101 F161 I198 R260 G339 V341
Binding residue
(residue number reindexed from 1)
G20 W94 F154 I191 R253 G332 V334
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:8ila, PDBe:8ila, PDBj:8ila
PDBsum8ila
PubMed37272735
UniProtA9Y8T1

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