Structure of PDB 8fiu Chain A Binding Site BS02

Receptor Information
>8fiu Chain A (length=219) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQ
DLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPR
GSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSI
LDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKT
ILKALGPGATLEEMMTACQ
Ligand information
Ligand IDY05
InChIInChI=1S/C41H38ClF6N9O5S/c1-18-15-55(16-19(2)62-18)23-5-6-24-28(13-23)50-39(57(40(24)59)30-8-7-27(42)33-35(30)54(3)52-38(33)53-63(4,60)61)29(11-20-9-21(43)12-22(44)10-20)49-31(58)17-56-36-32(34(51-56)37(45)46)25-14-26(25)41(36,47)48/h5-10,12-13,18-19,25-26,29,37H,11,14-17H2,1-4H3,(H,49,58)(H,52,53)/t18-,19+,25-,26+,29-/m0/s1
InChIKeyLOVFOWXSYBFKHA-POMDDMCKSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC1CN(CC(O1)C)c2ccc3c(c2)N=C(N(C3=O)c4ccc(c5c4n(nc5NS(=O)(=O)C)C)Cl)C(Cc6cc(cc(c6)F)F)NC(=O)Cn7c8c(c(n7)C(F)F)C9CC9C8(F)F
CACTVS 3.385C[C@H]1CN(C[C@@H](C)O1)c2ccc3C(=O)N(C(=Nc3c2)[C@H](Cc4cc(F)cc(F)c4)NC(=O)Cn5nc(C(F)F)c6[C@H]7C[C@H]7C(F)(F)c56)c8ccc(Cl)c9c(N[S](C)(=O)=O)nn(C)c89
CACTVS 3.385C[CH]1CN(C[CH](C)O1)c2ccc3C(=O)N(C(=Nc3c2)[CH](Cc4cc(F)cc(F)c4)NC(=O)Cn5nc(C(F)F)c6[CH]7C[CH]7C(F)(F)c56)c8ccc(Cl)c9c(N[S](C)(=O)=O)nn(C)c89
ACDLabs 12.01CC1CN(CC(C)O1)c1cc2N=C(C(Cc3cc(F)cc(F)c3)NC(=O)Cn3nc(C(F)F)c4c3C(F)(F)C3CC34)N(c3ccc(Cl)c4c(NS(C)(=O)=O)nn(C)c43)C(=O)c2cc1
OpenEye OEToolkits 2.0.7C[C@@H]1CN(C[C@@H](O1)C)c2ccc3c(c2)N=C(N(C3=O)c4ccc(c5c4n(nc5NS(=O)(=O)C)C)Cl)[C@H](Cc6cc(cc(c6)F)F)NC(=O)Cn7c8c(c(n7)C(F)F)[C@H]9C[C@H]9C8(F)F
FormulaC41 H38 Cl F6 N9 O5 S
NameN-[(1S)-1-{(3P)-3-{4-chloro-3-[(methanesulfonyl)amino]-1-methyl-1H-indazol-7-yl}-7-[(2R,6S)-2,6-dimethylmorpholin-4-yl]-4-oxo-3,4-dihydroquinazolin-2-yl}-2-(3,5-difluorophenyl)ethyl]-2-[(3bS,4aR)-3-(difluoromethyl)-5,5-difluoro-3b,4,4a,5-tetrahydro-1H-cyclopropa[3,4]cyclopenta[1,2-c]pyrazol-1-yl]acetamide
ChEMBL
DrugBank
ZINC
PDB chain8fiu Chain B Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8fiu Potent Long-Acting Inhibitors Targeting the HIV-1 Capsid Based on a Versatile Quinazolin-4-one Scaffold.
Resolution1.56 Å
Binding residue
(original residue number in PDB)
Y169 L172 R173 Q179 K182
Binding residue
(residue number reindexed from 1)
Y169 L172 R173 Q179 K182
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Biological Process
External links
PDB RCSB:8fiu, PDBe:8fiu, PDBj:8fiu
PDBsum8fiu
PubMed36719971
UniProtP12493|GAG_HV1N5 Gag polyprotein (Gene Name=gag)

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