Structure of PDB 8fb0 Chain A Binding Site BS02

Receptor Information
>8fb0 Chain A (length=153) Species: 9755 (Physeter catodon) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLK
TEAEMKASEDLKKQGVTVLTALGAILKKKGHHEAELKPLAQSHATKHKIP
IKYLEFISEAIIHVLHSRHPGNFGADAQGAMNKALELFRKDIAAKYKELG
YQG
Ligand information
Ligand IDACM
InChIInChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4)
InChIKeyDLFVBJFMPXGRIB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(N)C
CACTVS 3.341CC(N)=O
OpenEye OEToolkits 1.5.0CC(=O)N
FormulaC2 H5 N O
NameACETAMIDE
ChEMBLCHEMBL16081
DrugBankDB02736
ZINCZINC000008034818
PDB chain8fb0 Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8fb0 Interactions of metronidazole and chloramphenicol with myoglobin: Crystal structure of a Mb-acetamide product
Resolution1.76 Å
Binding residue
(original residue number in PDB)		F43 Q64 V68
Binding residue
(residue number reindexed from 1)		F43 Q64 V68
Annotation score1
Enzymatic activity
Enzyme Commision number 1.11.1.-
1.7.-.-
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0005344 oxygen carrier activity
GO:0016491 oxidoreductase activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
GO:0098809 nitrite reductase activity
Biological Process
GO:0015671 oxygen transport
GO:0019430 removal of superoxide radicals
Cellular Component
GO:0005737 cytoplasm
GO:0016528 sarcoplasm
GO:0070062 extracellular exosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fb0, PDBe:8fb0, PDBj:8fb0
PDBsum8fb0
PubMed37868702
UniProtP02185|MYG_PHYMC Myoglobin (Gene Name=MB)

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