Structure of PDB 8ejn Chain A Binding Site BS02
Receptor Information
>8ejn Chain A (length=137) Species:
129555
(Amphitrite ornata) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDANTLVQMKQHSSLTTGNFEKL
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
Ligand information
Ligand ID
5JC
InChI
InChI=1S/C6H4Cl2O/c7-4-1-2-6(9)5(8)3-4/h1-3,9H
InChIKey
HFZWRUODUSTPEG-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
Oc1ccc(Cl)cc1Cl
ACDLabs 12.01
Clc1c(ccc(c1)Cl)O
OpenEye OEToolkits 1.7.6
c1cc(c(cc1Cl)Cl)O
Formula
C6 H4 Cl2 O
Name
2,4-dichlorophenol
ChEMBL
CHEMBL1143
DrugBank
ZINC
ZINC000000388057
PDB chain
8ejn Chain A Residue 202 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8ejn
Comparative study of the binding and activation of 2,4-dichlorophenol by dehaloperoxidase A and B.
Resolution
1.481 Å
Binding residue
(original residue number in PDB)
F21 F35 H55 T56 V59
Binding residue
(residue number reindexed from 1)
F21 F35 H55 T56 V59
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0005344
oxygen carrier activity
GO:0019825
oxygen binding
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0015671
oxygen transport
GO:0098869
cellular oxidant detoxification
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8ejn
,
PDBe:8ejn
,
PDBj:8ejn
PDBsum
8ejn
PubMed
37480762
UniProt
Q9NAV8
[
Back to BioLiP
]