Structure of PDB 8e0f Chain A Binding Site BS02
Receptor Information
>8e0f Chain A (length=384) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
QLHLPQVLADAVSRLVLGKFGDLTDNFSSPHARRKVLAGVVMTTGTDVKD
AKVISVSTGTKCINGEYMSDRGLALNDCHAEIISRRSLLRFLYTQLELYL
NNKDDQKRSIFQKSERGGFRLKENVQFHLYISTSPCGDARIFSPHEPILE
EPADRHPNRKARGQLRTKIESGQGTIPVRSNASIQTWDGVLQGERLLTMS
CSDKIARWNVVGIQGSLLSIFVEPIYFSSIILGSLYHGDHLSRAMYQRIS
NIEDLPPLYTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDSAIEVINAT
TGKDELGRASRLCKHALYCRWMRVHGKVPSHLLRSKITKPNVYHESKLAA
KEYQAAKARLFTAFIKAGLGAWVEKPTEQDQFSL
Ligand information
>8e0f Chain D (length=32) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cguagcuaucagagccccccggcaucgcgagc
................................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8e0f
ADAR activation by inducing a syn conformation at guanosine adjacent to an editing site.
Resolution
2.7 Å
Binding residue
(original residue number in PDB)
R348 I456 F457 R474 R477 R481 G487 Q488 I491 R494 R510
Binding residue
(residue number reindexed from 1)
R33 I141 F142 R159 R162 R166 G172 Q173 I176 R179 R195
Enzymatic activity
Enzyme Commision number
3.5.4.37
: double-stranded RNA adenine deaminase.
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0004000
adenosine deaminase activity
Biological Process
GO:0006396
RNA processing
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8e0f
,
PDBe:8e0f
,
PDBj:8e0f
PDBsum
8e0f
PubMed
36243986
UniProt
P78563
|RED1_HUMAN Double-stranded RNA-specific editase 1 (Gene Name=ADARB1)
[
Back to BioLiP
]