Structure of PDB 8d40 Chain A Binding Site BS02
Receptor Information
>8d40 Chain A (length=422) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GRGSLKFPMPNYQVALFENEPAGTLILQLHAHYTIEGEEERVSYYMEGLF
DERSRGYFRIDSATGAVSTDSVLDRETKETHVLRVKAVDYSTPPRSATTY
ITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSPINANL
RYRVLGGAWDVFQLNESSGVVSTRAVLDREEAAEYQLLVEANDQGRNPGP
LSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGLNTAVLRVQATDRDQ
GQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLSIKAQD
GGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQ
AVDADSGENARLHYRLVDDFPFQIHNSSGWITVCAELDREEVEHYSFGVE
AVDHGSPPMSSSTSVSITVLDV
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
8d40 Chain A Residue 503 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8d40
Crystal structure of human CELSR1 EC1-4
Resolution
3.554 Å
Binding residue
(original residue number in PDB)
N112 H114 D144 D146 N150 D196
Binding residue
(residue number reindexed from 1)
N109 H111 D141 D143 N147 D193
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005509
calcium ion binding
Biological Process
GO:0007155
cell adhesion
GO:0007156
homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8d40
,
PDBe:8d40
,
PDBj:8d40
PDBsum
8d40
PubMed
UniProt
Q9NYQ6
|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 (Gene Name=CELSR1)
[
Back to BioLiP
]