Structure of PDB 8aan Chain A Binding Site BS02
Receptor Information
>8aan Chain A (length=228) Species:
562
(Escherichia coli) [
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TAVINHKKRKNSPRIVQSNDLTEAAYSLSRDQKRMLYLFVDQIRKSHDGI
CEIHVAKYAEIFGLTSAEASKDIRQALKSFAGKEVVFYYESFPWFIKPAH
SPSRGLYSVHINPYLIPFFIGLQNRFTQFRLSETKEITNPYAMRLYESLC
QYRKPDGSGIVSLKIDWIIERYQLPQSYQRMPDFRRRFLQVCVNEINSRT
PMRLSYIEKKKGRQTTHIVFSFRDITSM
Ligand information
>8aan Chain C (length=22) [
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ctgagggcaatttgtcacaggt
Receptor-Ligand Complex Structure
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PDB
8aan
Rep protein accommodates together dsDNA and ssDNA which enables a loop-back mechanism to plasmid DNA replication initiation.
Resolution
2.19 Å
Binding residue
(original residue number in PDB)
S75 S79 K80 R83 R124 G125 Y127 N159 P195 Q196 S197 Y198 D203 R207
Binding residue
(residue number reindexed from 1)
S66 S70 K71 R74 R104 G105 Y107 N139 P175 Q176 S177 Y178 D183 R187
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006260
DNA replication
GO:0006270
DNA replication initiation
GO:0006276
plasmid maintenance
GO:0071897
DNA biosynthetic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:8aan
,
PDBe:8aan
,
PDBj:8aan
PDBsum
8aan
PubMed
37713613
UniProt
P03856
|REPE1_ECOLI Replication initiation protein (Gene Name=repE)
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