Structure of PDB 7yct Chain A Binding Site BS02
Receptor Information
>7yct Chain A (length=164) Species:
291247
(Oxidus gracilis) [
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DPMTCDKLPKVPVPPLEEFIKSNPLQFAYVLTDTFDCTTRVYVQPARLSP
NQAATALDIRGSRIITNDFVGGPNNSAILNNCTTGEKATWYFQYTNLNTP
NGSSYCAYTCNGEEIAEYKCANNNNGTDPLQKQAVEVAKKVPNGDKIHYA
LDNCPEHHGCFAFY
Ligand information
Ligand ID
IJ5
InChI
InChI=1S/C8H6ClNO/c9-7-4-2-1-3-6(7)8(11)5-10/h1-4,8,11H/t8-/m0/s1
InChIKey
ZECLJEYAWRQVIB-QMMMGPOBSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
c1ccc(c(c1)C(C#N)O)Cl
CACTVS 3.385
O[CH](C#N)c1ccccc1Cl
OpenEye OEToolkits 2.0.7
c1ccc(c(c1)[C@H](C#N)O)Cl
CACTVS 3.385
O[C@@H](C#N)c1ccccc1Cl
Formula
C8 H6 Cl N O
Name
(2~{R})-2-(2-chlorophenyl)-2-oxidanyl-ethanenitrile;
(R)-2-chloromandelonitrile
ChEMBL
DrugBank
ZINC
PDB chain
7yct Chain A Residue 202 [
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Receptor-Ligand Complex Structure
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PDB
7yct
Structure-based site-directed mutagenesis of hydroxynitrile lyase from cyanogenic millipede, Oxidus gracilis for enhancing catalytic efficiency and enantioselectivity
Resolution
2.01 Å
Binding residue
(original residue number in PDB)
R42 F71 A79 W92 F94 Y107 A109 K121
Binding residue
(residue number reindexed from 1)
R40 F69 A77 W90 F92 Y105 A107 K119
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7yct
,
PDBe:7yct
,
PDBj:7yct
PDBsum
7yct
PubMed
38526556
UniProt
A0A2Z5XCT7
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