Structure of PDB 7vlz Chain A Binding Site BS02

Receptor Information
>7vlz Chain A (length=532) Species: 1300145 (Vibrio harveyi VHJR7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CDVEAFTSNSSNDVLNAIKTQGASCVNALFSAESRIQEAAFESGHMYNIA
KHTTDLAKAYAGGGSDELEALFLYLRAGYYAEFYNSKVSFLSWVTPAVKE
AVDAFVNNANFYENSDPHGKVLSEVIITMDSAGLQHAYLPQVTQWLTRWD
SQYAQNWYMRNAVNGVFTILFGGQWNEQFVQTIGNQTELAKALGDFALRS
SAIGASDEFMAANAGRELGRLTKYSGSASSTVKSKLTEIFAQYEMYGRGD
AIWLGAADTVSYYADCSDYGICNFESQLKGLVLSQSYTCSPTIRILSQNM
TQDQHVAACSKMGYEEGYFHTSLETGRQPVADDYNTQLQVNIFDSSDDYG
KYAGPIFNISTNNGGMYLEGDPATPGNIPNFVAYEAPYANPDHFVWNLEH
EYVHYLDGRFDLYGGFGHPTERIVWWSEGIAEYVSKENDNQAAIDTIKDG
STFTLSEIFETSYDGFDVDRIYRWGYLAVRFMFERHKDDVNQMLIETRQG
NWANYKATINQWAILYQSEFEQWQQALVLEHH
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7vlz Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
Resolution1.6 Å
Binding residue
(original residue number in PDB)		N104 F107 S108 R153 Y157 F160 Y161 I204 D207 W234 Y235 W252
Binding residue
(residue number reindexed from 1)		N27 F30 S31 R76 Y80 F83 Y84 I127 D130 W157 Y158 W175
Enzymatic activity
Enzyme Commision number 3.4.24.3: microbial collagenase.
Gene Ontology
Molecular Function
GO:0004222 metalloendopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7vlz, PDBe:7vlz, PDBj:7vlz
PDBsum7vlz
PubMed
UniProtA0A8B3DGT3

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