Structure of PDB 7vlt Chain A Binding Site BS02

Receptor Information
>7vlt Chain A (length=1145) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLPIAMRAVTNYVCLKEAYEEQKKKAADHPNRTPSIWLAMYRAFGRPILL
SSTFRYLADLLGFAGPLCISGIVQRVNESKEFLENAHVLAVLLFLALILQ
RTFLQASYYVTIETGINLRGALLAMIYNKILRLSTSNLSMGEMTLGQINN
LVAIETNQLMWFLFLCPNLWAMPVQIIMGVILLYNLLGSSALVGAAVIVL
LAPIQYFIATKLAEAQKSTLDYSTERLKKTNEILKGIKLLKLYAWEHIFC
KSVEETRMKELSSLKTFALYTSLSIFMNAAIPIAAVLATFVTHAYASGNN
LKPAEAFASLSLFHILVTPLFLLSTVVRFAVKAIISVQKLNEFLLSDEIG
DVAIKVTNGYFSWGSGLATLSNIDIRIPTGQLTMIVGQVGCGKSSLLLAI
LGEMQTLEGKVYWNSRYSVAYAAQKPWLLNATVEENITFGSSFNRQRYKA
VTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTNIV
FLDDPFSALDIHLSDHLMQEGILKFLQDDKRTVVLVTHKLQYLTHADWII
AMKDGSVLREGTLKDIQTKDVELYEHWKTLMNRWKTCWWYLTSGGFFLLF
LMIFSKLLKHSVIVAIDYWLATWTSEYQTFYVAGFSILCGAGIFLCLVTS
LTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLILNRFSADTNIID
QHIPPTLESLTRSTLLCLSAIGMISYATPVFLIALAPLGVAFYFIQKYFR
VASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRFKQRMLELTDT
NNIAYLFLSAANRWLEVRTDYLGACIVLTASIASISGSSNSGLVGLGLLY
ALTITNYLNWVVRNLADLEVQMGAVKKVNSFLTMESENYEGTMDPSQVPE
HWPQEGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSS
LSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIR
FNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQR
QLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIA
HRVHTILTADLVIVMKRGNILEYDTPESLLAQEDGVFASFVRADM
Ligand information
Ligand IDY01
InChIInChI=1S/C31H50O4/c1-20(2)7-6-8-21(3)25-11-12-26-24-10-9-22-19-23(35-29(34)14-13-28(32)33)15-17-30(22,4)27(24)16-18-31(25,26)5/h9,20-21,23-27H,6-8,10-19H2,1-5H3,(H,32,33)/t21-,23+,24+,25-,26+,27+,30+,31-/m1/s1
InChIKeyWLNARFZDISHUGS-MIXBDBMTSA-N
SMILES
SoftwareSMILES
CACTVS 3.352CC(C)CCC[C@@H](C)[C@H]1CC[C@H]2[C@@H]3CC=C4C[C@H](CC[C@]4(C)[C@H]3CC[C@]12C)OC(=O)CCC(O)=O
OpenEye OEToolkits 1.6.1CC(C)CCCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)OC(=O)CCC(=O)O)C)C
OpenEye OEToolkits 1.6.1CC(C)CCC[C@@H](C)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC=C4[C@@]3(CC[C@@H](C4)OC(=O)CCC(=O)O)C)C
CACTVS 3.352CC(C)CCC[CH](C)[CH]1CC[CH]2[CH]3CC=C4C[CH](CC[C]4(C)[CH]3CC[C]12C)OC(=O)CCC(O)=O
FormulaC31 H50 O4
NameCHOLESTEROL HEMISUCCINATE
ChEMBL
DrugBank
ZINCZINC000058638837
PDB chain7vlt Chain A Residue 2002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7vlt Structural identification of vasodilator binding sites on the SUR2 subunit.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		A464 Y468 A471 I596
Binding residue
(residue number reindexed from 1)		A202 Y206 A209 I334
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005267 potassium channel activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008281 sulfonylurea receptor activity
GO:0015459 potassium channel regulator activity
GO:0016887 ATP hydrolysis activity
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity
GO:0019905 syntaxin binding
GO:0042626 ATPase-coupled transmembrane transporter activity
GO:0044325 transmembrane transporter binding
GO:0044877 protein-containing complex binding
GO:0099104 potassium channel activator activity
GO:0140359 ABC-type transporter activity
GO:1901363 heterocyclic compound binding
Biological Process
GO:0000165 MAPK cascade
GO:0001508 action potential
GO:0001568 blood vessel development
GO:0001666 response to hypoxia
GO:0003007 heart morphogenesis
GO:0003018 vascular process in circulatory system
GO:0006357 regulation of transcription by RNA polymerase II
GO:0006813 potassium ion transport
GO:0006932 substrate-dependent cell migration, cell contraction
GO:0006950 response to stress
GO:0007005 mitochondrion organization
GO:0007507 heart development
GO:0007519 skeletal muscle tissue development
GO:0008015 blood circulation
GO:0008217 regulation of blood pressure
GO:0009410 response to xenobiotic stimulus
GO:0010467 gene expression
GO:0014823 response to activity
GO:0019395 fatty acid oxidation
GO:0033198 response to ATP
GO:0035864 response to potassium ion
GO:0035865 cellular response to potassium ion
GO:0036293 response to decreased oxygen levels
GO:0042311 vasodilation
GO:0042391 regulation of membrane potential
GO:0042542 response to hydrogen peroxide
GO:0043066 negative regulation of apoptotic process
GO:0043627 response to estrogen
GO:0045333 cellular respiration
GO:0045776 negative regulation of blood pressure
GO:0046034 ATP metabolic process
GO:0048144 fibroblast proliferation
GO:0051607 defense response to virus
GO:0055085 transmembrane transport
GO:0060976 coronary vasculature development
GO:0061337 cardiac conduction
GO:0062197 cellular response to chemical stress
GO:0070482 response to oxygen levels
GO:0071277 cellular response to calcium ion
GO:0071318 cellular response to ATP
GO:0071466 cellular response to xenobiotic stimulus
GO:0071805 potassium ion transmembrane transport
GO:0072359 circulatory system development
GO:0072592 oxygen metabolic process
GO:0086003 cardiac muscle cell contraction
GO:0097746 blood vessel diameter maintenance
GO:0098655 monoatomic cation transmembrane transport
GO:0098662 inorganic cation transmembrane transport
GO:1901379 regulation of potassium ion transmembrane transport
GO:1901652 response to peptide
GO:1903409 reactive oxygen species biosynthetic process
GO:1904880 response to hydrogen sulfide
GO:1990573 potassium ion import across plasma membrane
Cellular Component
GO:0001669 acrosomal vesicle
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005886 plasma membrane
GO:0008282 inward rectifying potassium channel
GO:0016020 membrane
GO:0030017 sarcomere
GO:0030315 T-tubule
GO:0031004 potassium ion-transporting ATPase complex
GO:0032991 protein-containing complex
GO:0042383 sarcolemma

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Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7vlt, PDBe:7vlt, PDBj:7vlt
PDBsum7vlt
PubMed35562524
UniProtQ63563|ABCC9_RAT ATP-binding cassette sub-family C member 9 (Gene Name=Abcc9)

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