Structure of PDB 7tsq Chain A Binding Site BS02

Receptor Information
>7tsq Chain A (length=218) Species: 550 (Enterobacter cloacae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EAANDIRSKKVLIIGAGSLGSMIAENLMRIGVVSQGILDADLLQTGNLSR
HALTMTSVGHNKAAALVEHLNRILPDASARSFSCAFPPESEVAKNSLRQY
DVIIDCTGDDGVLKSLAAFDWKSEKIFISLAMTWRAEGLFAFAASETSFP
VTDASSRFNASAGAWHPVFPARADDVQLWAAVGTKFICRVVSAPGRIYEY
FKQMPDGTVEKEPHEYGS
Ligand information
Ligand IDAMP
InChIInChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyUDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
SoftwareSMILES
CACTVS 3.370Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
FormulaC10 H14 N5 O7 P
NameADENOSINE MONOPHOSPHATE
ChEMBLCHEMBL752
DrugBankDB00131
ZINCZINC000003860156
PDB chain7tsq Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7tsq An E1-E2 fusion protein primes antiviral immune signalling in bacteria.
Resolution2.11 Å
Binding residue
(original residue number in PDB)
I384 G387 L408 D409 K432 F456 T477 V482
Binding residue
(residue number reindexed from 1)
I14 G17 L38 D39 K62 F86 T107 V112
Annotation score4
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Wed Nov 27 09:42:23 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7tsq', asym_id = 'A', bs = 'BS02', title = 'An E1-E2 fusion protein primes antiviral immune signalling in bacteria.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7tsq', asym_id='A', bs='BS02', title='An E1-E2 fusion protein primes antiviral immune signalling in bacteria.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008641', uniprot = '', pdbid = '7tsq', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008641', uniprot='', pdbid='7tsq', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>