Structure of PDB 7rdn Chain A Binding Site BS02

Receptor Information
>7rdn Chain A (length=215) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RLHDLRALLKRICSIQNYTRHVLIEWDVRWVNPLTLASKGWEPYQSASQS
QVPFKCCCCHAIMTIPLLKVADYTMKLNEKIWNSNIIGNHLQKCPWRENQ
VDLNKEYYLSSQNLIREIERIHTEIDRIVSFHYLSEKEIQKLAFFFDCKD
YSLVGLLLLGYTKFQKDDLVQCTACFHRASLKKLEYTEFNGHALWCRYYN
KELLPTMLLELIGKE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7rdn Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7rdn Structure of the pre-mRNA leakage 39-kDa protein reveals a single domain of integrated zf-C3HC and Rsm1 modules.
Resolution2.49 Å
Binding residue
(original residue number in PDB)		C134 C137 H172 C176
Binding residue
(residue number reindexed from 1)		C56 C59 H90 C94
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:7rdn, PDBe:7rdn, PDBj:7rdn
PDBsum7rdn
PubMed36271106
UniProtQ03760|PML39_YEAST Pre-mRNA leakage protein 39 (Gene Name=PML39)

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