Structure of PDB 7p52 Chain A Binding Site BS02
Receptor Information
>7p52 Chain A (length=112) Species:
243232
(Methanocaldococcus jannaschii DSM 2661) [
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MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGRE
YIVDLIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVV
RVRTKEEGKEAL
Ligand information
Ligand ID
AKG
InChI
InChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKey
KPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6
C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385
OC(=O)CCC(=O)C(O)=O
Formula
C5 H6 O5
Name
2-OXOGLUTARIC ACID
ChEMBL
CHEMBL1686
DrugBank
DB08845
ZINC
ZINC000001532519
PDB chain
7p52 Chain A Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
7p52
The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors GlnKs from Methanococcales .
Resolution
1.20002 Å
Binding residue
(original residue number in PDB)
R36 G37 Q39 G40 G41 I42 K58 P86 G87
Binding residue
(residue number reindexed from 1)
R36 G37 Q39 G40 G41 I42 K58 P86 G87
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0030234
enzyme regulator activity
Biological Process
GO:0006808
regulation of nitrogen utilization
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Cellular Component
External links
PDB
RCSB:7p52
,
PDBe:7p52
,
PDBj:7p52
PDBsum
7p52
PubMed
34445335
UniProt
Q60381
|GLNK1_METJA Nitrogen regulatory protein GlnK1 (Gene Name=glnK1)
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