Structure of PDB 7p1e Chain A Binding Site BS02

Receptor Information
>7p1e Chain A (length=383) Species: 341663 (Aspergillus terreus NIH2624) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPAKDATPYHVEFPLFRSANMASADKLSTGVGFHSFRIPAVVRTTTGRIL
AFAEGRRHDNRDFGDINLVYKRTKTTSDNGATLSDWESLREVVGSGDGTW
GNPTPVVDcGTIYLFLSWNNGSYSQKGGDELPDGTITKKIDTTWYGRRHL
YLTTSTDDGNTWSKPQDLTKELTPDGWSWDAVGPGNGIKLSSGELVVPAM
GRNIVGRGTPGQRTWSVQRLNGAGAEGTVCETPDGKLYRNDRPSKAGYRI
VARGTLSDGFSDFASDSGLPDPACQGSVLKYNTDAPPRTIFLNSASSDSR
RQMRVRISYDADAAKYDYGRKLADAPVSGAGYEGGYSSMTKTADYKIGAL
VESDFFNDGTGGGSYRSIIWRRFNLSWILNGPN
Ligand information
Ligand IDK99
InChIInChI=1S/C9H14F2O8/c10-7-5(16)4(15)6(3(14)2(13)1-12)19-9(7,11)8(17)18/h2-7,12-16H,1H2,(H,17,18)/t2-,3-,4-,5-,6+,7-,9-/m1/s1
InChIKeyKSUIKNBQJWNZMW-AWLRDIFTSA-N
SMILES
SoftwareSMILES
CACTVS 3.352OC[CH](O)[CH](O)[CH]1O[C](F)([CH](F)[CH](O)[CH]1O)C(O)=O
OpenEye OEToolkits 1.6.1C(C(C(C1C(C(C(C(O1)(C(=O)O)F)F)O)O)O)O)O
OpenEye OEToolkits 1.6.1C([C@H]([C@H]([C@H]1[C@@H]([C@H]([C@H]([C@@](O1)(C(=O)O)F)F)O)O)O)O)O
CACTVS 3.352OC[C@@H](O)[C@@H](O)[C@@H]1O[C@](F)([C@H](F)[C@H](O)[C@H]1O)C(O)=O
FormulaC9 H14 F2 O8
Name(2R,3R,4R,5R,6S)-2,3-bis(fluoranyl)-4,5-bis(oxidanyl)-6-[(1R,2R)-1,2,3-tris(oxidanyl)propyl]oxane-2-carboxylic acid;
(2R,3R,4R,5R,6S)-2,3-DIFLUORO-4,5-DIHYDROXY-6-[(1R,2R)-1,2,3-TRIHYDROXYPROPYL]OXANE-2-CARBOXYLIC ACID
ChEMBL
DrugBank
ZINCZINC000064754817
PDB chain7p1e Chain A Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7p1e Kinetic and Structural Characterization of Sialidases (Kdnases) from Ascomycete Fungal Pathogens.
Resolution1.53 Å
Binding residue
(original residue number in PDB)
D84 N86 E110 G113 S114 G115
Binding residue
(residue number reindexed from 1)
D65 N67 E91 G94 S95 G96
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004308 exo-alpha-sialidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006689 ganglioside catabolic process
GO:0009313 oligosaccharide catabolic process
Cellular Component
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0043231 intracellular membrane-bounded organelle

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7p1e, PDBe:7p1e, PDBj:7p1e
PDBsum7p1e
PubMed34724608
UniProtQ0CMX0

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