Structure of PDB 7l2u Chain A Binding Site BS02

Receptor Information
>7l2u Chain A (length=533) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKPGF
YFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVA
DNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK
IGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSV
LEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYM
IIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQY
FLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSL
AMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAV
VTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVI
LTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRK
AFRSGKLLQVGFTPDGKDDYRWCFRVDEVNWTT
Ligand information
Ligand IDXKP
InChIInChI=1S/C23H46NO8P/c1-3-5-7-9-10-12-14-16-23(26)32-21(20-31-33(27,28)30-18-17-24)19-29-22(25)15-13-11-8-6-4-2/h21H,3-20,24H2,1-2H3,(H,27,28)/t21-/m1/s1
InChIKeyVYUSSAVVRCGYLY-OAQYLSRUSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01C(CCCCCCCCC)(=O)OC(COC(=O)CCCCCCC)COP(O)(=O)OCCN
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)OC(COC(=O)CCCCCCC)COP(=O)(O)OCCN
CACTVS 3.385CCCCCCCCCC(=O)O[CH](COC(=O)CCCCCCC)CO[P](O)(=O)OCCN
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC)COP(=O)(O)OCCN
CACTVS 3.385CCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC)CO[P](O)(=O)OCCN
FormulaC23 H46 N O8 P
Name(11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate
ChEMBL
DrugBank
ZINC
PDB chain7l2u Chain A Residue 802 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7l2u Structural snapshots of TRPV1 reveal mechanism of polymodal functionality.
Resolution3.47 Å
Binding residue
(original residue number in PDB)
C634 F638
Binding residue
(residue number reindexed from 1)
C416 F420
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005216 monoatomic ion channel activity
Biological Process
GO:0006811 monoatomic ion transport
GO:0055085 transmembrane transport
Cellular Component
GO:0016020 membrane

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7l2u, PDBe:7l2u, PDBj:7l2u
PDBsum7l2u
PubMed34496225
UniProtO35433|TRPV1_RAT Transient receptor potential cation channel subfamily V member 1 (Gene Name=Trpv1)

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