Structure of PDB 7kik Chain A Binding Site BS02

Receptor Information
>7kik Chain A (length=121) Species: 10834 (Wheat dwarf virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPFSIFHPNIQAAKDCNQVRDFITKEVDSDVNTAEWGTFVAVSTRFRVYS
KYLFLTYPQCTLEPQYALDSLRTLLNKYEPLYIAAVRELHEDGSPHLHVL
VQNKLRASITNPNALNLRMDT
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain7kik Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7kik Wheat dwarf virus Rep domain circular permutation complexed with a single-stranded DNA 10-mer comprising the cleavage site and Mn2+
Resolution1.73 Å
Binding residue
(original residue number in PDB)		E104 H112 H114
Binding residue
(residue number reindexed from 1)		E88 H96 H98
Annotation score4
Enzymatic activity
Enzyme Commision number 2.7.7.-
3.1.21.-
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0006260 DNA replication

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Molecular Function
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Biological Process
External links
PDB RCSB:7kik, PDBe:7kik, PDBj:7kik
PDBsum7kik
PubMed36541758
UniProtQ67622|REP_WDVS Replication-associated protein (Gene Name=C1/C2)

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