Structure of PDB 7kbu Chain A Binding Site BS02

Receptor Information
>7kbu Chain A (length=221) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DSCMSFQCKRGHICKADQQGKPHCVCQDPVTCPPTKPLDQVCGTDNQTYA
SSCHLFATKCRLEGTKKGHQLQLDYFGACKSIPTCTDFEVIQFPLRMRDW
LKNILMQLYEANSEVKKIYLDEKRLLAGDHPIDLLLRDFKKNYHMYVYPV
HWQFSELDQHPMDRVLTHSELAPLRASLVPMEHCITRFFEECDPNKDKHI
TLKEWGHCFGIKEEDIDENLL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7kbu Chain A Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7kbu Interplay between hevin, SPARC, and MDGAs: Modulators of neurexin-neuroligin transsynaptic bridges.
Resolution2.27 Å
Binding residue
(original residue number in PDB)
D635 N637 D639 H641 E646
Binding residue
(residue number reindexed from 1)
D193 N195 D197 H199 E204
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Cellular Component
GO:0005615 extracellular space

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7kbu, PDBe:7kbu, PDBj:7kbu
PDBsum7kbu
PubMed33535026
UniProtQ14515|SPRL1_HUMAN SPARC-like protein 1 (Gene Name=SPARCL1)

[Back to BioLiP]