Structure of PDB 7fj3 Chain A Binding Site BS02

Receptor Information
>7fj3 Chain A (length=1308) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MERPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTY
CSTLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHP
ADQPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRA
IQQLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADR
VACAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVAR
MTHADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIAN
TNLVTALVMGKAVSNMDDVARYLLGGVGSARVRADLVVVGDRLVFLEALE
KRVYQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPD
PRTHPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPA
EVQCAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLA
PGNADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPL
ALCPVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVI
HGSERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELP
EDCAAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLP
PLIWDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLV
HNRPVRNENQPLHPHHDAEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRV
YQLVQTMVVPETDEEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADA
MLILQETVTNMAERTTPLLASVAPDAGMATVATRDMRTHDGSLHHGLLMM
AYQPNDATLLEGAFFYPAPVNALFACADHLGAMRDVGAEVRAAAQHVPCV
PHFLGANYYATVRQPVAQHAAQSRADENTLSYALMAGYFKMSPVAFTHQL
RRQLHPGFALTVVRQDRFATENVLFAEKASESYFMGQMQVARTESGGGLH
LQLTQPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLFATRGAPPMLD
ADADDYLRRTVNAGNRLAPVPVFGQMLPQVPAGLARGQQSVCEFIATPVS
VDLAYFRRACNPRGRAAGEVHGEEGLMFDHSHADPAHPHRATANPWASQR
HSYADRLYNGQYNMSGPAYSPCFKFFTPARGLARLIADTGAAASPTSNGE
YQFKRPVGAGELVEDPCALFQEAYPPLCASDSALLRTPLGAEEHFAQYLI
RDESPLKG
Ligand information
>7fj3 Chain W (length=23) Species: 10345 (Suid alphaherpesvirus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
MSVQIGNGLLMVVAPGTLTVGSA
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7fj3 Structures of pseudorabies virus capsids.
Resolution4.53 Å
Binding residue
(original residue number in PDB)		V158 Q159 A160 V161 L162 D163 S164 V1049 L1060 L1062
Binding residue
(residue number reindexed from 1)		V158 Q159 A160 V161 L162 D163 S164 V1040 L1051 L1053
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:7fj3, PDBe:7fj3, PDBj:7fj3
PDBsum7fj3
PubMed35318331
UniProtG3G8T2

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