Structure of PDB 7eer Chain A Binding Site BS02
Receptor Information
>7eer Chain A (length=326) Species:
1422
(Geobacillus stearothermophilus) [
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MKTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQD
PHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIG
ELERMTQFKEKSAGKEAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQH
IELTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNP
KAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSG
QSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVL
DEGAEKANRVASEMVRKMEQAMGLGR
Ligand information
Ligand ID
ZCW
InChI
InChI=1S/C10H11NO/c12-6-5-8-7-11-10-4-2-1-3-9(8)10/h1-4,7,11-12H,5-6H2
InChIKey
MBBOMCVGYCRMEA-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.370
OCCc1c[nH]c2ccccc12
ACDLabs 12.01
OCCc2c1ccccc1nc2
OpenEye OEToolkits 1.7.6
c1ccc2c(c1)c(c[nH]2)CCO
Formula
C10 H11 N O
Name
2-(1H-indol-3-yl)ethanol
ChEMBL
CHEMBL226545
DrugBank
ZINC
ZINC000000003252
PDB chain
7eer Chain A Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
7eer
Crystal structure of Tryptophanyl-tRNA synthetase from Bacillus stearothermophilus in complex with O5E6 and ATP
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
F5 S6 G7 V40 H43 Y125 M129 I133 V141 Q147
Binding residue
(residue number reindexed from 1)
F5 S6 G7 V40 H43 Y125 M129 I133 V141 Q147
Annotation score
2
Enzymatic activity
Enzyme Commision number
6.1.1.2
: tryptophan--tRNA ligase.
Gene Ontology
Molecular Function
GO:0000166
nucleotide binding
GO:0004812
aminoacyl-tRNA ligase activity
GO:0004830
tryptophan-tRNA ligase activity
GO:0005524
ATP binding
Biological Process
GO:0006412
translation
GO:0006418
tRNA aminoacylation for protein translation
GO:0006436
tryptophanyl-tRNA aminoacylation
Cellular Component
GO:0005737
cytoplasm
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7eer
,
PDBe:7eer
,
PDBj:7eer
PDBsum
7eer
PubMed
UniProt
P00953
|SYW_GEOSE Tryptophan--tRNA ligase (Gene Name=trpS)
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