Structure of PDB 7dlk Chain A Binding Site BS02

Receptor Information
>7dlk Chain A (length=363) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEEQIVPFYGKHQAGITTAHQTYVYFAALDVTAKEKSDIITLFRNWTSLT
QMLTSGKKMSAEQRNQYLPPQDTGESADLSPSNLTVTFGFGPSFFEKDGK
DRFGLKSKKPKHLAALPAMPNDNLDEKQGGGDICIQVCADDEQVAFHALR
NLLNQAVGTCEVRFVNKGFLSGGKNGETPRNLFGFKDGTGNQSTEDDSLM
NSIVWVQSGEPDWMTGGTYMAFRKIKMFLEIWDRSSLKDQEDTFGRRKSS
GAPFGQKKETDPVKLNQIPSNSHVSLAKSTGKQILRRAFSYTEGLDPKTG
YMDAGLLFISFQKNPDNQFIPMLKALSAKDALNEYTQTIGSALYACPGGC
KKGEYIAQRLLES
Ligand information
Ligand IDOXY
InChIInChI=1S/O2/c1-2
InChIKeyMYMOFIZGZYHOMD-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0		O=O
FormulaO2
NameOXYGEN MOLECULE
ChEMBLCHEMBL1234886
DrugBankDB09140
ZINC
PDB chain7dlk Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7dlk Structure of dye-decolorizing peroxidase from Bacillus subtilis in complex with veratryl alcohol.
Resolution2.1 Å
Binding residue
(original residue number in PDB)		D187 R286
Binding residue
(residue number reindexed from 1)		D187 R286
Annotation score1
Enzymatic activity
Enzyme Commision number 1.11.1.-
4.98.1.1: protoporphyrin ferrochelatase.
Gene Ontology
Molecular Function
GO:0004325 ferrochelatase activity
GO:0004601 peroxidase activity
GO:0016829 lyase activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0033212 iron import into cell
GO:0098869 cellular oxidant detoxification
Cellular Component
GO:0005576 extracellular region
GO:0005829 cytosol
GO:0005886 plasma membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7dlk, PDBe:7dlk, PDBj:7dlk
PDBsum7dlk
PubMed34687768
UniProtP39597|EFEB_BACSU Deferrochelatase (Gene Name=efeB)

[Back to BioLiP]