Structure of PDB 7cy7 Chain A Binding Site BS02

Receptor Information
>7cy7 Chain A (length=872) Species: 3055,83333 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVA
ATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNG
KLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNL
QEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKN
KHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFK
GQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGA
VALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAA
SGRQTVDAALAAAQTNAARAAAMSVALASEYQLVQNAQLPQRWSQSARKS
LAILEATARKEATAQMEAAGGSFCGQFPVDPAFKVLSLEYSAPNPDIARA
IRRVDSVPNPPLPSHVVAIQSTAVDADLSLAMGVSLTPGRHTSYLVDARA
LQQSNSAAVAARKADGDKWGPACDEMFRGCRCVTGQEVVFYTAVKEPAGS
LFKPSFDGPAFRPSWGELSGKATGVVACVLQVPIGKETDIICAEYDNLVS
KGQFATVDRFGGDHTVNMTGNALIQNDGKAISKGYAVAHRARVTSNVYGK
ANDVSLQRLAETVWSVVEKRLSFMPAYRDLVITEQGKPFMLGATATNIIS
LTENQGVMLHLDTDDGVWTIILWFHRHSGIIAGGEFVLPSLGISFQPLDF
TIVVFAANTIVHGTRPLQTTGKIIRWGSSHFLRFKDVNALAQLGAAYGVD
ELDAKQRDQLEEVDAANSKDGVGAARRVASCMAAERKAAIEAQKAACVRG
VVMNPCTGRMPSLLFWQVWRKP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7cy7 Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Resolution2.15 Å
Binding residue
(original residue number in PDB)		V242 R244 F245 M253 I259 N261 K264 Y270 A271 R275 F416 R418 V457
Binding residue
(residue number reindexed from 1)		V607 R609 F610 M618 I624 N626 K629 Y635 A636 R640 F781 R783 V822
Enzymatic activity
Enzyme Commision number 1.14.99.-
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005515 protein binding
GO:0015144 carbohydrate transmembrane transporter activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
GO:0120204 methylcytosine to 5-glyceryl-methylcytosine dioxygenase activity
GO:1901982 maltose binding
Biological Process
GO:0006974 DNA damage response
GO:0008643 carbohydrate transport
GO:0010109 regulation of photosynthesis
GO:0015768 maltose transport
GO:0034219 carbohydrate transmembrane transport
GO:0034289 detection of maltose stimulus
GO:0042956 maltodextrin transmembrane transport
GO:0055085 transmembrane transport
GO:0060326 cell chemotaxis
Cellular Component
GO:0005634 nucleus
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
GO:1990060 maltose transport complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7cy7, PDBe:7cy7, PDBj:7cy7
PDBsum7cy7
PubMed33531488
UniProtA0A2K3D5Z7;
P0AEX9|MALE_ECOLI Maltose/maltodextrin-binding periplasmic protein (Gene Name=malE)

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