Structure of PDB 7cii Chain A Binding Site BS02

Receptor Information
>7cii Chain A (length=518) Species: 1510823 (Streptomyces sp. 590 KI-2014) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELDGGDFALPEGGLDDDRRLRALDAVDEYLTRKRKHLVGYQATQDMQGTA
LDLARFMPNNINNLGDPFQSGGYKPNTKVVERAVLDYYAKLWHAERPHDP
ADPESYWGYMLSMGSTEGNMYALWNARDYLSGKALIQPPRNPNAHHPVAF
YSEDTHYSFAKAVAVLGVETFHAVGLEKYADECPLVDPVTGLRTWPTEVP
SRPGPSGLSWDGPGEIDVDALAVLVEFFAAKGHPVFVNLNLGSTFKGAHD
DVRAVCERLLPIFERHGLVQREVVYGSCPQTGRPLVDVRRGFWIHVDGAL
GAGYAPFLRLAAEDPEGYGWTPEAELPEFDFGLRLPTAGHGEVDMVSSIA
MSGHKWAGAPWPCGIYMTKVKYQISPPSQPDYIGAPDTTFAGSRNGFSPL
ILWDHLSRYSYRDQVERIREAQELAAYLERRLTAMERELGVELWPARTPG
AVTVRFRKPSAELVAKWSLSSQDVLMVPGDETTRRSYVHVFVMPSVDRAK
LDALLAELAEDPVILGAP
Ligand information
Ligand IDG06
InChIInChI=1S/C14H21N2O7PS/c1-9-13(17)11(10(6-15-9)8-23-24(19,20)21)7-16-12(4-5-25-3)14(18)22-2/h6-7,12,17H,4-5,8H2,1-3H3,(H2,19,20,21)/b16-7+/t12-/m0/s1
InChIKeyVXNUIRDVLGPXAG-QFULYMJESA-N
SMILES
SoftwareSMILES
CACTVS 3.385COC(=O)[C@H](CCSC)N=Cc1c(O)c(C)ncc1CO[P](O)(O)=O
OpenEye OEToolkits 2.0.7Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(CCSC)C(=O)OC)O
OpenEye OEToolkits 2.0.7Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/[C@@H](CCSC)C(=O)OC)O
CACTVS 3.385COC(=O)[CH](CCSC)N=Cc1c(O)c(C)ncc1CO[P](O)(O)=O
FormulaC14 H21 N2 O7 P S
Namemethyl (2S)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-4-methylsulfanyl-butanoate
ChEMBL
DrugBank
ZINC
PDB chain7cii Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7cii Structural basis for substrate specificity of l-methionine decarboxylase.
Resolution1.51 Å
Binding residue
(original residue number in PDB)
Y421 S432
Binding residue
(residue number reindexed from 1)
Y382 S393
Annotation score1
Enzymatic activity
Enzyme Commision number 4.1.1.57: methionine decarboxylase.
External links